NOTCH1

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:6.0 FPKM
GTEx:15.0 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Low
Glandular cells:High
Peripheral nerve/ganglion:Low

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody CAB008112

 

Antibody CAB022466

 

Endothelial cells

Medium   Low  

Glandular cells

High   Medium  

Peripheral nerve/ganglion

Low   Low  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

6.0

overview Male, age 54
Sample 1
FPKM: 8.5
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 7.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 7.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 7.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 6.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 3.6
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 2.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

15.0

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 15.5
Samples: 149

Max RPKM: 33.9
Min RPKM: 5.1
Std RPKM: 4.2
Median RPKM: 15.1
GTEX-132AR-2826-SM-5IJFV 33.9
GTEX-ZAJG-2626-SM-5S2NU 29.1
GTEX-XAJ8-0726-SM-47JY5 25.5
GTEX-WHWD-1526-SM-4OORV 25.3
GTEX-ZC5H-2426-SM-4WAZ6 23.4
GTEX-ZF28-2526-SM-57WFH 23.3
GTEX-X15G-1526-SM-4PQZM 23.1
GTEX-131XG-1526-SM-5GCNQ 22.7
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 14.5
Samples: 196

Max RPKM: 28.6
Min RPKM: 4.7
Std RPKM: 3.4
Median RPKM: 14.3
GTEX-14C38-2626-SM-5RQI4 28.6
GTEX-13S86-1626-SM-5Q5C5 25.7
GTEX-117YW-1826-SM-5PNY5 23.0
GTEX-RU1J-1326-SM-46MUL 23.0
GTEX-R53T-1326-SM-48FCQ 22.9
GTEX-XXEK-1926-SM-4BRVD 22.1
GTEX-Q734-1126-SM-48TZY 22.0
GTEX-PWN1-1426-SM-48TDF 21.2
Show all