STOM

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:71.1 FPKM
GTEx:65.7 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Low
Peripheral nerve/ganglion:Medium

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA010961

 

Antibody HPA011419

 

Endothelial cells

Not detected   Medium  

Glandular cells

Low   High  

Peripheral nerve/ganglion

Medium   High  
   
   

COLON - HPA RNA-seq

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Average FPKM

71.1

overview Male, age 54
Sample 1
FPKM: 43.0
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 46.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 31.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 74.0
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 141.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 96.6
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 64.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

65.7

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 80.2
Samples: 149

Max RPKM: 241.4
Min RPKM: 11.8
Std RPKM: 42.7
Median RPKM: 73.1
GTEX-11WQK-2526-SM-5CVL8 241.4
GTEX-11EM3-1626-SM-5N9CO 217.1
GTEX-11I78-1326-SM-5PNY9 209.0
GTEX-13CF3-1326-SM-5LZXZ 183.7
GTEX-12WSL-1826-SM-5LZW9 183.3
GTEX-132AR-2826-SM-5IJFV 181.3
GTEX-12WSJ-1426-SM-5GCON 160.2
GTEX-ZZ64-0826-SM-5E449 160.1
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 51.3
Samples: 196

Max RPKM: 258.6
Min RPKM: 5.3
Std RPKM: 41.1
Median RPKM: 39.7
GTEX-13CF3-1426-SM-5K7YY 258.6
GTEX-13O3P-2326-SM-5KM55 176.7
GTEX-WEY5-1426-SM-4LMJ3 159.5
GTEX-11TT1-1026-SM-5PNW7 159.4
GTEX-O5YT-1426-SM-3MJHC 156.7
GTEX-QLQ7-1126-SM-4R1KN 153.9
GTEX-12WSJ-1526-SM-5GCNI 153.7
GTEX-ZYVF-2826-SM-5GIDK 150.2
Show all