EBAG9

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:19.7 FPKM
GTEx:5.4 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Low
Glandular cells:High
Peripheral nerve/ganglion:Low

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA021153

 

Antibody HPA021154

 

Antibody CAB072810

 

Endothelial cells

Medium   Not detected   Not detected  

Glandular cells

Medium   High   Medium  

Peripheral nerve/ganglion

Low   Medium   Medium  
     
     

COLON - HPA RNA-seq

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Average FPKM

19.7

overview Male, age 54
Sample 1
FPKM: 20.0
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 21.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 18.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 19.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 18.8
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 19.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 20.5
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

5.4

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 5.0
Samples: 149

Max RPKM: 7.3
Min RPKM: 3.1
Std RPKM: 0.8
Median RPKM: 5
GTEX-147GR-2826-SM-5RQK8 7.3
GTEX-145ME-1126-SM-5SIAT 7.2
GTEX-12ZZY-2726-SM-5EQ45 7.1
GTEX-ZTSS-1226-SM-51MSZ 6.9
GTEX-1399U-2226-SM-5KLZI 6.8
GTEX-145LS-2926-SM-5O99G 6.8
GTEX-1477Z-2126-SM-5Q5CM 6.8
GTEX-ZVT2-1726-SM-51MRO 6.8
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 5.7
Samples: 196

Max RPKM: 8.3
Min RPKM: 2.1
Std RPKM: 1
Median RPKM: 5.8
GTEX-Y5LM-1526-SM-4VDTA 8.3
GTEX-12BJ1-2126-SM-5BC5O 7.8
GTEX-145MN-1726-SM-5SIA6 7.8
GTEX-11EM3-1526-SM-5A5KN 7.7
GTEX-11TTK-2426-SM-5PNYO 7.7
GTEX-XV7Q-2126-SM-4BRVX 7.7
GTEX-11VI4-1526-SM-5EQKC 7.6
GTEX-13O21-2426-SM-5MR4A 7.5
Show all