WHSC1L1

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:18.4 FPKM
GTEx:5.9 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
Peripheral nerve/ganglion:High
 

Antibody staining

Antibody HPA005659

 

Antibody HPA018893

 

Antibody CAB013721

 

Endothelial cells

Low   Low   Medium  

Glandular cells

Low   High   High  

Peripheral nerve/ganglion

Medium   Not available   High  
     
     
     

COLON - HPA RNA-seq

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Average FPKM

18.4

overview Male, age 54
Sample 1
FPKM: 19.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 22.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 21.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 13.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 16.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 13.6
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 21.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

5.9

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 6.2
Samples: 149

Max RPKM: 10.9
Min RPKM: 3.3
Std RPKM: 1.1
Median RPKM: 6
GTEX-11WQK-2526-SM-5CVL8 10.9
GTEX-131XG-1526-SM-5GCNQ 9.1
GTEX-13OVI-2126-SM-5KM3U 9.0
GTEX-13VXT-2026-SM-5L3EW 8.6
GTEX-111YS-1826-SM-5GIEP 8.4
GTEX-YJ8A-1726-SM-5P9IQ 8.4
GTEX-145ME-1126-SM-5SIAT 8.0
GTEX-WYVS-1126-SM-4SOJX 8.0
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 5.7
Samples: 196

Max RPKM: 9.2
Min RPKM: 2.9
Std RPKM: 1.2
Median RPKM: 5.5
GTEX-11WQK-2126-SM-5EQME 9.2
GTEX-13O3O-2526-SM-5L3DR 8.9
GTEX-12KS4-2426-SM-5LU8P 8.8
GTEX-13O3P-2326-SM-5KM55 8.8
GTEX-111YS-1626-SM-5GZZ9 8.7
GTEX-XXEK-1926-SM-4BRVD 8.7
GTEX-U3ZH-1326-SM-4DXSF 8.1
GTEX-11P81-1126-SM-5GU5G 8.0
Show all