TAF1

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:5.5 FPKM
GTEx:5.3 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA001075

 

Antibody CAB016283

 

Endothelial cells

Low   Medium  

Glandular cells

Low   High  

Peripheral nerve/ganglion

Medium   Not available  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

5.5

overview Male, age 54
Sample 1
FPKM: 5.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 6.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 6.9
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 4.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 6.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 3.6
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 4.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

5.3

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 5.6
Samples: 149

Max RPKM: 9.5
Min RPKM: 2.9
Std RPKM: 1.1
Median RPKM: 5.6
GTEX-132AR-2826-SM-5IJFV 9.5
GTEX-14E6C-2226-SM-5QGQG 9.5
GTEX-ZPIC-2626-SM-57WE2 9.2
GTEX-Y9LG-1326-SM-4VBQB 8.6
GTEX-148VJ-2426-SM-5NQ9Y 8.3
GTEX-1211K-1826-SM-5EGJ2 7.9
GTEX-13111-1926-SM-5GCOL 7.8
GTEX-13O1R-2426-SM-5KLZZ 7.8
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 5.0
Samples: 196

Max RPKM: 8.2
Min RPKM: 1.9
Std RPKM: 1.1
Median RPKM: 5
GTEX-11TUW-2026-SM-5EQL8 8.2
GTEX-Y114-1526-SM-4TT79 8.0
GTEX-11P81-1126-SM-5GU5G 7.9
GTEX-YEC4-1926-SM-5IFHJ 7.5
GTEX-148VJ-2626-SM-5QGPI 7.4
GTEX-WEY5-1426-SM-4LMJ3 7.4
GTEX-13U4I-2426-SM-5LU34 7.3
GTEX-U3ZH-1326-SM-4DXSF 7.2
Show all