CASK

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:23.1 FPKM
GTEx:3.3 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Low
Glandular cells:High
Peripheral nerve/ganglion:Low

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA023857

 

Antibody CAB001949

 

Endothelial cells

Medium   Not detected  

Glandular cells

High   Medium  

Peripheral nerve/ganglion

Not available   Not detected  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

23.1

overview Male, age 54
Sample 1
FPKM: 26.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 34.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 22.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 16.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 22.0
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 14.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 25.0
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

3.3

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 2.3
Samples: 149

Max RPKM: 3.6
Min RPKM: 1.5
Std RPKM: 0.3
Median RPKM: 2.3
GTEX-YJ8A-1726-SM-5P9IQ 3.6
GTEX-13SLW-2826-SM-5Q5ES 3.4
GTEX-145LS-2926-SM-5O99G 3.3
GTEX-11WQK-2526-SM-5CVL8 3.1
GTEX-XBED-1726-SM-47JYO 3.0
GTEX-11GS4-1826-SM-5HL4T 2.9
GTEX-ZXES-1726-SM-5E43G 2.9
GTEX-111YS-1826-SM-5GIEP 2.8
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 4.3
Samples: 196

Max RPKM: 7.8
Min RPKM: 1.5
Std RPKM: 1.4
Median RPKM: 4.4
GTEX-R53T-1326-SM-48FCQ 7.8
GTEX-ZF2S-1926-SM-4WWAN 7.1
GTEX-139YR-2126-SM-5KM11 7.0
GTEX-WFG7-1526-SM-4LVMG 7.0
GTEX-12BJ1-2126-SM-5BC5O 6.8
GTEX-11P82-1026-SM-5BC5J 6.7
GTEX-11VI4-1526-SM-5EQKC 6.7
GTEX-OXRK-1726-SM-3NB16 6.7
Show all