TRIM4

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:11.5 FPKM
GTEx:8.3 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
Peripheral nerve/ganglion:Not available
 

Antibody staining

Antibody HPA019356

 

Antibody HPA029461

 

Endothelial cells

Medium   Low  

Glandular cells

High   Medium  

Peripheral nerve/ganglion

Not available   Not available  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

11.5

overview Male, age 54
Sample 1
FPKM: 6.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 16.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 10.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 9.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 11.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 10.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 14.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

8.3

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 8.5
Samples: 149

Max RPKM: 14.5
Min RPKM: 3.5
Std RPKM: 1.9
Median RPKM: 8.2
GTEX-148VJ-2426-SM-5NQ9Y 14.5
GTEX-11P81-1426-SM-5P9JN 14.3
GTEX-145ME-1126-SM-5SIAT 13.5
GTEX-11WQK-2526-SM-5CVL8 13.3
GTEX-ZAJG-2626-SM-5S2NU 13.2
GTEX-132AR-2826-SM-5IJFV 12.7
GTEX-1399U-2226-SM-5KLZI 12.6
GTEX-Y9LG-1326-SM-4VBQB 12.1
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 8.2
Samples: 196

Max RPKM: 14.2
Min RPKM: 2.1
Std RPKM: 1.9
Median RPKM: 8
GTEX-11P81-1126-SM-5GU5G 14.2
GTEX-11TTK-2426-SM-5PNYO 14.1
GTEX-11WQK-2126-SM-5EQME 14.1
GTEX-145ME-0826-SM-5O9AF 13.3
GTEX-ZXES-1626-SM-5NQ7L 13.2
GTEX-13OVI-2026-SM-5J1MU 12.5
GTEX-R53T-1326-SM-48FCQ 12.3
GTEX-S341-1426-SM-4AD6U 12.2
Show all