GBAS

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:38.2 FPKM
GTEx:30.4 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
Peripheral nerve/ganglion:Not available
 

Antibody staining

Antibody HPA063084

 

Endothelial cells

Medium  

Glandular cells

High  

Peripheral nerve/ganglion

Not available  
 
 
 

COLON - HPA RNA-seq

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Average FPKM

38.2

overview Male, age 54
Sample 1
FPKM: 31.3
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 43.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 40.0
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 23.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 31.2
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 51.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 46.0
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

30.4

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 34.3
Samples: 149

Max RPKM: 50.8
Min RPKM: 11.4
Std RPKM: 7.4
Median RPKM: 33.1
GTEX-ZP4G-1526-SM-57WE5 50.8
GTEX-ZPCL-1626-SM-57WGC 49.9
GTEX-ZTSS-1226-SM-51MSZ 48.9
GTEX-XUZC-1526-SM-4BRV4 48.7
GTEX-ZVT2-1726-SM-51MRO 48.5
GTEX-ZT9W-1726-SM-51MS3 48.4
GTEX-WHPG-1626-SM-4M1ZL 48.0
GTEX-1399U-2226-SM-5KLZI 47.9
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 26.6
Samples: 196

Max RPKM: 46.6
Min RPKM: 7.7
Std RPKM: 7.5
Median RPKM: 25.3
GTEX-Y8LW-1226-SM-4WWDP 46.6
GTEX-X5EB-0926-SM-46MVT 46.4
GTEX-XXEK-1926-SM-4BRVD 46.1
GTEX-11TTK-2426-SM-5PNYO 45.3
GTEX-Y114-1526-SM-4TT79 44.8
GTEX-T6MO-0826-SM-4DM51 43.8
GTEX-111YS-1626-SM-5GZZ9 43.2
GTEX-TKQ1-0626-SM-4DXTS 42.3
Show all