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COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:61.1 FPKM
GTEx:32.5 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Medium
Peripheral nerve/ganglion:High
 

Antibody staining

Antibody HPA017324

 

Antibody CAB018649

 

Endothelial cells

Not detected   Not detected  

Glandular cells

Medium   Medium  

Peripheral nerve/ganglion

High   High  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

61.1

overview Male, age 54
Sample 1
FPKM: 25.3
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 16.0
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 36.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 93.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 85.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 79.2
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 91.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

32.5

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 39.0
Samples: 149

Max RPKM: 349.1
Min RPKM: 0.2
Std RPKM: 35.9
Median RPKM: 33.7
GTEX-WFON-1326-SM-4LVMN 349.1
GTEX-ZYY3-2226-SM-5E45A 125.8
GTEX-11WQK-2526-SM-5CVL8 109.1
GTEX-ZZ64-0826-SM-5E449 103.2
GTEX-X4EO-2726-SM-4E3HS 98.8
GTEX-12ZZY-2726-SM-5EQ45 98.0
GTEX-139D8-2926-SM-5IJBM 93.5
GTEX-13SLW-2826-SM-5Q5ES 89.7
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 26.0
Samples: 196

Max RPKM: 230.9
Min RPKM: 0.6
Std RPKM: 33.2
Median RPKM: 14
GTEX-14BMV-2426-SM-5S2PP 230.9
GTEX-13FHP-2426-SM-5KLZ5 212.5
GTEX-ZXES-1626-SM-5NQ7L 204.8
GTEX-12ZZZ-2426-SM-5GCNN 158.7
GTEX-145ME-0826-SM-5O9AF 97.7
GTEX-147JS-2526-SM-5S2Q8 95.1
GTEX-13O3P-2326-SM-5KM55 94.9
GTEX-11WQK-2126-SM-5EQME 94.4
Show all