PAM

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:55.0 FPKM
GTEx:23.0 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Medium

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA042260

 

Antibody CAB026119

 

Endothelial cells

Not detected   Not detected  

Glandular cells

Low   Not detected  

Peripheral nerve/ganglion

Medium   Medium  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

55.0

overview Male, age 54
Sample 1
FPKM: 52.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 53.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 26.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 47.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 72.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 80.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 52.9
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

23.0

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 28.4
Samples: 149

Max RPKM: 46.5
Min RPKM: 16.4
Std RPKM: 5.5
Median RPKM: 27.7
GTEX-13SLW-2826-SM-5Q5ES 46.5
GTEX-ZYT6-2826-SM-5GICX 43.1
GTEX-132NY-2726-SM-5PNY2 42.8
GTEX-117XS-2226-SM-5GIE1 40.9
GTEX-XAJ8-0726-SM-47JY5 40.2
GTEX-ZQG8-2426-SM-57WEE 37.8
GTEX-11ZU8-1126-SM-5EQ5K 37.3
GTEX-YECK-2826-SM-5IFHF 37.3
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 17.6
Samples: 196

Max RPKM: 49.6
Min RPKM: 3.7
Std RPKM: 10.9
Median RPKM: 13.8
GTEX-12ZZZ-2426-SM-5GCNN 49.6
GTEX-13O3O-2526-SM-5L3DR 49.0
GTEX-11O72-2226-SM-5PNW2 43.4
GTEX-14BMV-2426-SM-5S2PP 42.7
GTEX-ZXES-1626-SM-5NQ7L 42.2
GTEX-11TTK-2426-SM-5PNYO 41.1
GTEX-145LS-2726-SM-5Q5D8 40.3
GTEX-11ONC-2026-SM-5HL61 39.1
Show all