SKP2

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:7.8 FPKM
GTEx:2.8 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Low
Peripheral nerve/ganglion:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA054633

 

Antibody CAB013491

 

Antibody CAB013533

 

Endothelial cells

Low   Not detected   Low  

Glandular cells

Medium   Low   Medium  

Peripheral nerve/ganglion

Medium   Not detected   Low  
     
     
     

COLON - HPA RNA-seq

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Average FPKM

7.8

overview Male, age 54
Sample 1
FPKM: 7.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 7.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 10.0
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 4.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 5.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 7.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 12.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

2.8

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 2.6
Samples: 149

Max RPKM: 4.6
Min RPKM: 1
Std RPKM: 0.8
Median RPKM: 2.6
GTEX-YJ8O-1426-SM-5PNV9 4.6
GTEX-13X6K-2726-SM-5O9DG 4.5
GTEX-12ZZX-2726-SM-5N9FT 4.3
GTEX-ZC5H-2426-SM-4WAZ6 4.2
GTEX-132AR-2826-SM-5IJFV 4.1
GTEX-13N2G-2226-SM-5IJCU 4.1
GTEX-WHPG-1626-SM-4M1ZL 4.1
GTEX-WYVS-1126-SM-4SOJX 4.1
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 3.0
Samples: 196

Max RPKM: 6.8
Min RPKM: 0.7
Std RPKM: 1
Median RPKM: 2.8
GTEX-R53T-1326-SM-48FCQ 6.8
GTEX-13OW6-2126-SM-5N9GL 6.5
GTEX-144GN-1126-SM-5LU33 5.7
GTEX-1128S-1626-SM-5H12O 5.6
GTEX-146FQ-1926-SM-5NQBY 5.6
GTEX-U3ZH-1326-SM-4DXSF 5.4
GTEX-139YR-2126-SM-5KM11 5.3
GTEX-PWOO-1326-SM-48TCJ 5.3
Show all