SNCA

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:7.7 FPKM
GTEx:4.5 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA005459

 

Antibody CAB010877

 

Endothelial cells

Not detected   Not detected  

Glandular cells

Not detected   Not detected  

Peripheral nerve/ganglion

Not available   Medium  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

7.7

overview Male, age 54
Sample 1
FPKM: 4.5
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 4.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 1.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 5.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 12.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 17.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 8.3
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

4.5

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 6.5
Samples: 149

Max RPKM: 22.2
Min RPKM: 1.1
Std RPKM: 3.4
Median RPKM: 5.5
GTEX-ZVZQ-2626-SM-59HLB 22.2
GTEX-11DXY-2026-SM-5N9CZ 16.0
GTEX-147GR-2826-SM-5RQK8 15.1
GTEX-145LS-2926-SM-5O99G 14.7
GTEX-145MH-2726-SM-5QGQ6 13.7
GTEX-139D8-2926-SM-5IJBM 12.9
GTEX-11PRG-2026-SM-5GU5F 12.7
GTEX-13PVQ-2726-SM-5L3H7 12.5
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 2.5
Samples: 196

Max RPKM: 15.4
Min RPKM: 0.2
Std RPKM: 2.6
Median RPKM: 1.4
GTEX-12ZZZ-2426-SM-5GCNN 15.4
GTEX-111VG-2226-SM-5N9DU 14.2
GTEX-14BMV-2426-SM-5S2PP 13.2
GTEX-11O72-2226-SM-5PNW2 12.1
GTEX-145LS-2726-SM-5Q5D8 11.9
GTEX-145MO-2426-SM-5NQ9W 9.1
GTEX-11TTK-2426-SM-5PNYO 9.0
GTEX-148VJ-2626-SM-5QGPI 9.0
Show all