BOC

COLON - Expression summary

? »

RNA expression

HPA:5.5 FPKM
GTEx:15.5 RPKM

COLON - Immunohistochemistry

? »
 

Antibody staining

Antibody CAB025806

 

Endothelial cells

Medium  

Glandular cells

High  

Peripheral nerve/ganglion

Medium  
 
 
 

COLON - HPA RNA-seq

? »

Average FPKM

5.5

overview Male, age 54
Sample 1
FPKM: 7.0
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 4.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 1.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 3.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 5.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 13.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 2.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

? »

Average RPKM

15.5

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 21.4
Samples: 149

Max RPKM: 50.5
Min RPKM: 10.5
Std RPKM: 6.9
Median RPKM: 20.5
GTEX-1339X-1726-SM-5P9J9 50.5
GTEX-14A5H-1626-SM-5SIAN 49.8
GTEX-13OVI-2126-SM-5KM3U 41.8
GTEX-13FHO-2726-SM-5K7VG 37.5
GTEX-11I78-1326-SM-5PNY9 36.8
GTEX-11EM3-1626-SM-5N9CO 34.4
GTEX-14E6C-2226-SM-5QGQG 34.0
GTEX-1211K-1826-SM-5EGJ2 33.2
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 9.7
Samples: 196

Max RPKM: 47.9
Min RPKM: 0.5
Std RPKM: 8.7
Median RPKM: 7
GTEX-11TUW-2026-SM-5EQL8 47.9
GTEX-13O61-1626-SM-5KM3T 34.3
GTEX-11ZVC-2126-SM-5EGJ1 32.0
GTEX-ZV6S-1226-SM-59HLH 31.1
GTEX-11GSP-1626-SM-5986N 30.6
GTEX-XXEK-1926-SM-4BRVD 30.6
GTEX-145LS-2726-SM-5Q5D8 29.7
GTEX-XAJ8-0426-SM-47JYJ 26.6
Show all