SNAPIN

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:15.6 FPKM
GTEx:17.9 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:High
Glandular cells:Medium
Peripheral nerve/ganglion:Not available
 

Antibody staining

Antibody HPA046974

 

Endothelial cells

High  

Glandular cells

Medium  

Peripheral nerve/ganglion

Not available  
 
 

COLON - HPA RNA-seq

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Average FPKM

15.6

overview Male, age 54
Sample 1
FPKM: 15.0
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 13.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 11.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 10.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 16.2
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 22.6
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 19.0
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

17.9

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 20.4
Samples: 149

Max RPKM: 28.6
Min RPKM: 12.6
Std RPKM: 2.7
Median RPKM: 20.4
GTEX-1399U-2226-SM-5KLZI 28.6
GTEX-XV7Q-2226-SM-4BRVY 27.7
GTEX-131YS-2926-SM-5EGKI 26.6
GTEX-ZP4G-1526-SM-57WE5 26.5
GTEX-11EI6-2626-SM-5PNVT 25.4
GTEX-12ZZY-2726-SM-5EQ45 24.6
GTEX-WQUQ-2626-SM-4MVNP 24.4
GTEX-ZPU1-1726-SM-4WWFV 24.3
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 15.4
Samples: 196

Max RPKM: 25.3
Min RPKM: 4.5
Std RPKM: 3.7
Median RPKM: 15
GTEX-X5EB-0926-SM-46MVT 25.3
GTEX-145LS-2726-SM-5Q5D8 23.3
GTEX-WQUQ-2526-SM-4MVNO 23.3
GTEX-13FHP-2426-SM-5KLZ5 23.2
GTEX-QLQ7-1126-SM-4R1KN 23.1
GTEX-11TTK-2426-SM-5PNYO 22.3
GTEX-1339X-1626-SM-5IJDN 22.1
GTEX-111YS-1626-SM-5GZZ9 22.0
Show all