MMEL1

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:1.1 FPKM
GTEx:0.3 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:Medium

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA007876

 

Antibody HPA008205

 

Antibody CAB020786

 

Endothelial cells

High   Medium   High  

Glandular cells

High   Medium   High  

Peripheral nerve/ganglion

Not detected   Medium   Not detected  
     
     
     

COLON - HPA RNA-seq

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Average FPKM

1.1

overview Male, age 54
Sample 1
FPKM: 2.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 0.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 0.9
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 3.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 0.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 0.2
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 0.2
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

0.3

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 0.2
Samples: 149

Max RPKM: 0.8
Min RPKM: 0
Std RPKM: 0.1
Median RPKM: 0.2
GTEX-147GR-2826-SM-5RQK8 0.8
GTEX-11DXY-2026-SM-5N9CZ 0.7
GTEX-13OW6-2226-SM-5N9FL 0.6
GTEX-11PRG-2026-SM-5GU5F 0.5
GTEX-12KS4-2326-SM-5EGJB 0.5
GTEX-145LS-2926-SM-5O99G 0.5
GTEX-ZE7O-2626-SM-51MSS 0.5
GTEX-117XS-2226-SM-5GIE1 0.4
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 0.4
Samples: 196

Max RPKM: 1.2
Min RPKM: 0
Std RPKM: 0.2
Median RPKM: 0.4
GTEX-XUJ4-2026-SM-4BOOW 1.2
GTEX-ZF2S-1926-SM-4WWAN 1.2
GTEX-11LCK-2026-SM-5A5MA 0.9
GTEX-PLZ5-1126-SM-3P613 0.9
GTEX-13111-0726-SM-5DUVE 0.8
GTEX-1399R-2226-SM-5P9JB 0.8
GTEX-13D11-0826-SM-5KLZJ 0.8
GTEX-Q2AH-1226-SM-48TZL 0.8
Show all