SOD1

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:168.8 FPKM
GTEx:81.4 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Low
Glandular cells:Low
Peripheral nerve/ganglion:Low

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA001401

 

Antibody CAB008670

 

Endothelial cells

Medium   Low  

Glandular cells

Low   Low  

Peripheral nerve/ganglion

Medium   Low  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

168.8

overview Male, age 54
Sample 1
FPKM: 153.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 137.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 171.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 215.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 132.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 158.0
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 212.7
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

81.4

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 77.5
Samples: 149

Max RPKM: 243.6
Min RPKM: 45.4
Std RPKM: 21.7
Median RPKM: 74.4
GTEX-132AR-2826-SM-5IJFV 243.6
GTEX-12WSG-2426-SM-5EQLZ 159.0
GTEX-ZAJG-2626-SM-5S2NU 150.6
GTEX-ZTTD-2626-SM-57WEX 138.9
GTEX-ZF28-2526-SM-57WFH 125.8
GTEX-131XE-1026-SM-5EGKE 123.5
GTEX-146FH-2426-SM-5Q5EW 121.4
GTEX-1399U-2226-SM-5KLZI 112.8
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 85.3
Samples: 196

Max RPKM: 215.5
Min RPKM: 41.3
Std RPKM: 24.7
Median RPKM: 79.5
GTEX-132AR-2726-SM-5PNVN 215.5
GTEX-PWOO-1326-SM-48TCJ 185.0
GTEX-XV7Q-2126-SM-4BRVX 179.6
GTEX-ZVP2-1526-SM-5NQ82 158.2
GTEX-QDVN-1326-SM-48TZ3 155.9
GTEX-131XE-0826-SM-5HL9W 150.7
GTEX-111CU-1426-SM-5GZYP 146.8
GTEX-1399R-2226-SM-5P9JB 146.5
Show all