COL6A1

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:59.7 FPKM
GTEx:588.3 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA019142

 

Antibody HPA029401

 

Endothelial cells

Not detected   Medium  

Glandular cells

Not detected   Not detected  

Peripheral nerve/ganglion

Not available   Not detected  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

59.7

overview Male, age 54
Sample 1
FPKM: 84.6
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 47.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 27.9
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 50.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 127.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 69.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 10.9
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

588.3

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 825.7
Samples: 149

Max RPKM: 1628.3
Min RPKM: 383.8
Std RPKM: 227.3
Median RPKM: 785.3
GTEX-X15G-1526-SM-4PQZM 1628.3
GTEX-ZVT3-2826-SM-5GU6A 1594.7
GTEX-13PL7-2426-SM-5J2N3 1356.0
GTEX-13OW6-2226-SM-5N9FL 1270.1
GTEX-13OW5-2826-SM-5KM1G 1242.3
GTEX-XUW1-1826-SM-4BOQD 1203.0
GTEX-Z93S-2626-SM-57WBX 1187.2
GTEX-13OW8-2726-SM-5L3FZ 1183.5
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 350.9
Samples: 196

Max RPKM: 1112.1
Min RPKM: 30.2
Std RPKM: 283.7
Median RPKM: 253.9
GTEX-S341-1426-SM-4AD6U 1112.1
GTEX-RWS6-1826-SM-47JXX 1102.5
GTEX-145LS-2726-SM-5Q5D8 979.3
GTEX-13OW5-2626-SM-5MR3M 959.5
GTEX-145MO-2426-SM-5NQ9W 934.4
GTEX-11TUW-2026-SM-5EQL8 909.1
GTEX-OXRL-1426-SM-3NM9E 896.8
GTEX-Z93S-2426-SM-5HL8N 866.0
Show all