MBD1

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:14.3 FPKM
GTEx:16.0 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:Medium

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody CAB009017

 

Antibody CAB036003

 

Endothelial cells

Not detected   High  

Glandular cells

Medium   Medium  

Peripheral nerve/ganglion

Not detected   Medium  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

14.3

overview Male, age 54
Sample 1
FPKM: 14.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 17.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 14.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 11.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 15.0
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 14.6
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 11.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

16.0

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 16.2
Samples: 149

Max RPKM: 23.7
Min RPKM: 10.2
Std RPKM: 2.6
Median RPKM: 16.2
GTEX-14E6C-2226-SM-5QGQG 23.7
GTEX-ZAJG-2626-SM-5S2NU 23.3
GTEX-11WQK-2526-SM-5CVL8 22.3
GTEX-13OW6-2226-SM-5N9FL 22.0
GTEX-139D8-2926-SM-5IJBM 21.6
GTEX-V955-1726-SM-4JBHF 21.3
GTEX-13OW5-2826-SM-5KM1G 20.7
GTEX-ZF28-2526-SM-57WFH 20.7
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 15.7
Samples: 196

Max RPKM: 26.5
Min RPKM: 10.3
Std RPKM: 2.2
Median RPKM: 15.3
GTEX-11WQK-2126-SM-5EQME 26.5
GTEX-11TUW-2026-SM-5EQL8 22.1
GTEX-R53T-1326-SM-48FCQ 21.8
GTEX-13OW6-2126-SM-5N9GL 21.0
GTEX-13S86-1626-SM-5Q5C5 20.5
GTEX-WHWD-1226-SM-4OOS1 20.5
GTEX-131XE-0826-SM-5HL9W 20.1
GTEX-13OVJ-1726-SM-5IJDZ 20.0
Show all