SECTM1

COLON - Expression summary

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RNA expression

HPA:23.7 FPKM
GTEx:14.0 RPKM

COLON - Immunohistochemistry

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Antibody staining

Antibody HPA051214

 

Endothelial cells

Medium  

Glandular cells

High  

Peripheral nerve/ganglion

Medium  
 
 
 

COLON - HPA RNA-seq

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Average FPKM

23.7

overview Male, age 54
Sample 1
FPKM: 15.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 34.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 13.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 48.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 28.9
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 9.2
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 15.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

14.0

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 10.6
Samples: 149

Max RPKM: 90.3
Min RPKM: 1.5
Std RPKM: 12.8
Median RPKM: 6.8
GTEX-132AR-2826-SM-5IJFV 90.3
GTEX-ZAJG-2626-SM-5S2NU 87.2
GTEX-14A5H-1626-SM-5SIAN 84.2
GTEX-11TUW-2326-SM-5EQMO 35.2
GTEX-12WSJ-1426-SM-5GCON 32.8
GTEX-11WQK-2526-SM-5CVL8 30.6
GTEX-ZC5H-2426-SM-4WAZ6 30.1
GTEX-WI4N-2226-SM-4OOS9 27.6
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 17.4
Samples: 196

Max RPKM: 83.8
Min RPKM: 1.5
Std RPKM: 15.7
Median RPKM: 11.6
GTEX-14E6E-1526-SM-5RQIG 83.8
GTEX-132AR-2726-SM-5PNVN 72.1
GTEX-1399U-1926-SM-5IFH7 71.0
GTEX-ZYVF-2826-SM-5GIDK 63.6
GTEX-WOFM-2026-SM-4OOSQ 59.7
GTEX-ZYWO-1626-SM-5E44H 59.3
GTEX-UJHI-1126-SM-4IHLN 58.4
GTEX-Q2AH-1226-SM-48TZL 58.2
Show all