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COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:0.2 FPKM
GTEx:1.5 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA034504

 

Antibody HPA034505

 

Endothelial cells

Not detected   Low  

Glandular cells

Not detected   Low  

Peripheral nerve/ganglion

Not detected   Low  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

0.2

overview Male, age 54
Sample 1
FPKM: 0.0
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 0.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 0.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 0.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 0.0
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 0.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 0.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

1.5

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 1.3
Samples: 149

Max RPKM: 4.8
Min RPKM: 0.3
Std RPKM: 0.6
Median RPKM: 1.1
GTEX-14A5H-1626-SM-5SIAN 4.8
GTEX-11TUW-2326-SM-5EQMO 4.1
GTEX-14E6C-2226-SM-5QGQG 3.7
GTEX-14A5I-2426-SM-5Q5CP 3.6
GTEX-13O1R-2426-SM-5KLZZ 3.3
GTEX-13OW6-2226-SM-5N9FL 2.8
GTEX-147GR-2826-SM-5RQK8 2.5
GTEX-11DXY-2026-SM-5N9CZ 2.4
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 1.6
Samples: 196

Max RPKM: 5.2
Min RPKM: 0.4
Std RPKM: 0.6
Median RPKM: 1.5
GTEX-11TUW-2026-SM-5EQL8 5.2
GTEX-1399U-1926-SM-5IFH7 3.6
GTEX-ZVP2-1526-SM-5NQ82 3.4
GTEX-XUZC-1326-SM-4BRV2 3.3
GTEX-11DXZ-1726-SM-5H12M 3.2
GTEX-13S86-1626-SM-5Q5C5 3.1
GTEX-ZVT2-1926-SM-5GU5T 3.1
GTEX-14C38-2626-SM-5RQI4 3.0
Show all