IGSF6

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:6.9 FPKM
GTEx:1.2 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA041023

 

Antibody HPA041072

 

Endothelial cells

Not detected   Not detected  

Glandular cells

Low   Not detected  

Peripheral nerve/ganglion

Not detected   Low  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

6.9

overview Male, age 54
Sample 1
FPKM: 3.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 5.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 3.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 1.0
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 23.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 5.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 4.9
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

1.2

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 0.6
Samples: 149

Max RPKM: 2.5
Min RPKM: 0
Std RPKM: 0.4
Median RPKM: 0.5
GTEX-ZY6K-1326-SM-5GZWP 2.5
GTEX-YEC3-2026-SM-4WWFL 2.0
GTEX-11TT1-0926-SM-5GU5M 1.9
GTEX-ZQG8-2426-SM-57WEE 1.7
GTEX-WHPG-1626-SM-4M1ZL 1.5
GTEX-147GR-2826-SM-5RQK8 1.4
GTEX-11P81-1426-SM-5P9JN 1.3
GTEX-X15G-1526-SM-4PQZM 1.3
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 1.8
Samples: 196

Max RPKM: 30.1
Min RPKM: 0
Std RPKM: 2.4
Median RPKM: 1.3
GTEX-14C38-2626-SM-5RQI4 30.1
GTEX-Q2AH-1226-SM-48TZL 10.4
GTEX-XMK1-1726-SM-4B64Z 7.4
GTEX-ZVP2-1526-SM-5NQ82 5.7
GTEX-144GM-1226-SM-5LU52 5.6
GTEX-R53T-1326-SM-48FCQ 5.1
GTEX-Q734-1126-SM-48TZY 5.0
GTEX-11EM3-1526-SM-5A5KN 4.8
Show all