SCAMP2

COLON - Expression summary

? »

Protein expression

h
m
l
n

RNA expression

HPA:58.7 FPKM
GTEx:36.4 RPKM

COLON - Immunohistochemistry

? »

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA014699

 

Antibody HPA019194

 

Endothelial cells

Medium   Medium  

Glandular cells

High   High  

Peripheral nerve/ganglion

Not detected   Not detected  
   
   
   

COLON - HPA RNA-seq

? »

Average FPKM

58.7

overview Male, age 54
Sample 1
FPKM: 62.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 69.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 70.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 51.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 44.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 48.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 64.3
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

? »

Average RPKM

36.4

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 18.7
Samples: 149

Max RPKM: 34.3
Min RPKM: 9.8
Std RPKM: 4.1
Median RPKM: 18
GTEX-Y5LM-1426-SM-5RQJL 34.3
GTEX-V955-1726-SM-4JBHF 29.7
GTEX-11TT1-0926-SM-5GU5M 29.6
GTEX-YJ8A-1726-SM-5P9IQ 29.2
GTEX-XBED-1726-SM-47JYO 28.5
GTEX-1339X-1726-SM-5P9J9 28.3
GTEX-132AR-2826-SM-5IJFV 28.2
GTEX-WFON-1326-SM-4LVMN 28.0
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 54.2
Samples: 196

Max RPKM: 109.6
Min RPKM: 9.6
Std RPKM: 26.9
Median RPKM: 60.7
GTEX-131XG-1826-SM-5LZV4 109.6
GTEX-Y5LM-1526-SM-4VDTA 103.0
GTEX-WOFM-2026-SM-4OOSQ 100.8
GTEX-132AR-2726-SM-5PNVN 100.0
GTEX-1399R-2226-SM-5P9JB 94.8
GTEX-ZVT2-1926-SM-5GU5T 94.8
GTEX-WFON-1426-SM-4LVMT 92.9
GTEX-UPIC-1726-SM-4IHKG 92.4
Show all