ETFA

SKIN - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:33.7 FPKM
GTEx:19.2 RPKM

SKIN 1 - Immunohistochemistry

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Annotated protein
expression

Fibroblasts:Low
Keratinocytes:Low
Langerhans:Low
Melanocytes:Low

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA018990

 

Antibody HPA018993

 

Antibody HPA018996

 

Antibody HPA024089

 

Fibroblasts

Medium   Not detected   Not detected   Not detected  

Keratinocytes

Medium   Not detected   Not detected   Low  

Langerhans

Medium   Not detected   Not detected   Low  

Melanocytes

Medium   Not detected   Low   Not detected  
       
       
       

SKIN 2 - Immunohistochemistry

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Annotated protein
expression

Epidermal cells:Medium
 
 
 

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA018990

 

Antibody HPA018993

 

Antibody HPA018996

 

Antibody HPA024089

 

Epidermal cells

High   Not detected   Low   Medium  
          
          
          
       
       
       

SKIN - HPA RNA-seq

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Average FPKM

33.7

overview Female, age 34
Sample 1
FPKM: 39.5
Cell types%
Keratinocytes: 60
Other cell types: 40
overview Female, age 30
Sample 2
FPKM: 39.2
Cell types%
Keratinocytes: 55
Other cell types: 45
N/A Male, age 57
Sample 3
FPKM: 22.4

SKIN - GTEx RNA-seq

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Average RPKM

19.2

GTEx sample id

RPKM

 

Skin - Not Sun Exposed (Suprapubic)

Skin - Not Sun Exposed (Suprapubic)
RPKM: 19.3
Samples: 250

Max RPKM: 32.2
Min RPKM: 9.8
Std RPKM: 4.3
Median RPKM: 18.9
GTEX-ZTTD-2826-SM-4YCFA 32.2
GTEX-WK11-2726-SM-3NMAQ 31.1
GTEX-12WSB-2926-SM-59HKL 29.9
GTEX-WYJK-0526-SM-3NM8Z 29.8
GTEX-ZYT6-2326-SM-5GZY3 29.4
GTEX-144GL-0626-SM-5LU4D 28.6
GTEX-1117F-2926-SM-5GZYI 28.5
GTEX-14A6H-2026-SM-5Q5DD 28.5
Show all
 

Skin - Sun Exposed (Lower leg)

Skin - Sun Exposed (Lower leg)
RPKM: 19.1
Samples: 357

Max RPKM: 40.7
Min RPKM: 10.1
Std RPKM: 3.7
Median RPKM: 18.8
GTEX-SJXC-0126-SM-2XCFF 40.7
GTEX-1122O-2126-SM-5EGIR 37.5
GTEX-S7SE-0126-SM-2XCD5 31.0
GTEX-13IVO-0126-SM-5J1NG 29.3
GTEX-147F3-0526-SM-5SI98 28.9
GTEX-131XE-2326-SM-5PNZ2 27.9
GTEX-1399T-2826-SM-5KLYZ 27.4
GTEX-12WSB-0126-SM-59HJN 27.2
Show all