CSAD

COLON - Expression summary

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RNA expression

HPA:6.8 FPKM
GTEx:12.7 RPKM

COLON - Immunohistochemistry

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Antibody staining

Antibody HPA039487

 

Endothelial cells

Medium  

Glandular cells

Medium  

Peripheral nerve/ganglion

Medium  
 
 

COLON - HPA RNA-seq

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Average FPKM

6.8

overview Male, age 54
Sample 1
FPKM: 6.6
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 5.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 5.0
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 8.0
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 4.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 10.2
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 7.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

12.7

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 14.3
Samples: 149

Max RPKM: 29.4
Min RPKM: 4.6
Std RPKM: 6.2
Median RPKM: 13.1
GTEX-13OW6-2226-SM-5N9FL 29.4
GTEX-1477Z-2126-SM-5Q5CM 28.3
GTEX-13X6K-2726-SM-5O9DG 27.9
GTEX-145LS-2926-SM-5O99G 26.3
GTEX-ZYY3-2226-SM-5E45A 25.8
GTEX-13OW5-2826-SM-5KM1G 25.5
GTEX-13X6I-2726-SM-5Q5ET 25.5
GTEX-145MH-2726-SM-5QGQ6 25.3
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 11.2
Samples: 196

Max RPKM: 22.6
Min RPKM: 5.5
Std RPKM: 3.5
Median RPKM: 10.5
GTEX-13W3W-2126-SM-5K7UX 22.6
GTEX-13OW5-2626-SM-5MR3M 20.4
GTEX-U3ZH-1326-SM-4DXSF 20.4
GTEX-ZYFC-2626-SM-5NQ6S 20.4
GTEX-11O72-2226-SM-5PNW2 20.3
GTEX-145MO-2426-SM-5NQ9W 20.2
GTEX-147JS-2526-SM-5S2Q8 20.2
GTEX-13FHP-2426-SM-5KLZ5 20.0
Show all