GLCE

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:10.6 FPKM
GTEx:3.9 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Not available
 

Antibody staining

Antibody HPA040481

 

Antibody HPA048216

 

Endothelial cells

Low   Not detected  

Glandular cells

Medium   Low  

Peripheral nerve/ganglion

Not available   Not detected  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

10.6

overview Male, age 54
Sample 1
FPKM: 13.5
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 13.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 12.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 8.0
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 10.0
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 6.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 10.5
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

3.9

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 2.6
Samples: 149

Max RPKM: 5
Min RPKM: 1.2
Std RPKM: 0.6
Median RPKM: 2.4
GTEX-1211K-1826-SM-5EGJ2 5.0
GTEX-13SLW-2826-SM-5Q5ES 4.2
GTEX-YJ8A-1726-SM-5P9IQ 4.2
GTEX-11ONC-1926-SM-5GU75 4.0
GTEX-14E6E-1726-SM-5S2R6 4.0
GTEX-V955-1726-SM-4JBHF 3.9
GTEX-117XS-2226-SM-5GIE1 3.8
GTEX-146FH-2426-SM-5Q5EW 3.7
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 5.3
Samples: 196

Max RPKM: 9.9
Min RPKM: 1.6
Std RPKM: 1.9
Median RPKM: 5.3
GTEX-1122O-1526-SM-5N9CL 9.9
GTEX-R55G-1226-SM-48FDC 9.6
GTEX-133LE-1526-SM-5IFEN 9.1
GTEX-11VI4-1526-SM-5EQKC 8.9
GTEX-145MN-1726-SM-5SIA6 8.9
GTEX-OXRK-1726-SM-3NB16 8.9
GTEX-13O21-2426-SM-5MR4A 8.6
GTEX-WFG7-1526-SM-4LVMG 8.6
Show all