ITGAV

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:18.5 FPKM
GTEx:11.7 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA004856

 

Antibody CAB002499

 

Endothelial cells

Medium   Medium  

Glandular cells

Medium   Medium  

Peripheral nerve/ganglion

Low   Not detected  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

18.5

overview Male, age 54
Sample 1
FPKM: 21.3
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 21.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 19.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 14.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 27.2
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 11.2
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 14.0
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

11.7

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 12.9
Samples: 149

Max RPKM: 23.8
Min RPKM: 6
Std RPKM: 3.2
Median RPKM: 12.5
GTEX-13X6I-2726-SM-5Q5ET 23.8
GTEX-ZYY3-2226-SM-5E45A 22.7
GTEX-13SLW-2826-SM-5Q5ES 21.8
GTEX-11TT1-0926-SM-5GU5M 21.5
GTEX-XAJ8-0726-SM-47JY5 20.9
GTEX-11WQK-2526-SM-5CVL8 20.0
GTEX-ZVT4-2626-SM-5N9GJ 19.9
GTEX-YJ8A-1726-SM-5P9IQ 19.8
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 10.4
Samples: 196

Max RPKM: 27.1
Min RPKM: 4.2
Std RPKM: 3.9
Median RPKM: 9.4
GTEX-13O3O-2526-SM-5L3DR 27.1
GTEX-XAJ8-0426-SM-47JYJ 26.1
GTEX-13O3P-2326-SM-5KM55 22.2
GTEX-13OVG-1426-SM-5K7VP 22.0
GTEX-11WQK-2126-SM-5EQME 19.9
GTEX-Z93S-2426-SM-5HL8N 19.9
GTEX-111VG-2226-SM-5N9DU 19.7
GTEX-13CF3-1426-SM-5K7YY 18.5
Show all