SSB

SKIN - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:26.1 FPKM
GTEx:8.6 RPKM

SKIN 1 - Immunohistochemistry

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Annotated protein
expression

Fibroblasts:Medium
Keratinocytes:Medium
Langerhans:Medium
Melanocytes:Medium

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA012385

 

Antibody HPA017287

 

Antibody CAB004643

 

Fibroblasts

Medium   Low   High  

Keratinocytes

Medium   Medium   High  

Langerhans

Medium   Medium   High  

Melanocytes

Low   Medium   High  
     
     
     

SKIN 2 - Immunohistochemistry

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Annotated protein
expression

Epidermal cells:High
 
 
 
 

Antibody staining

Antibody HPA012385

 

Antibody HPA017287

 

Antibody CAB004643

 

Epidermal cells

Medium   High   High  
        
        
        
     
     
     

SKIN - HPA RNA-seq

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Average FPKM

26.1

overview Female, age 34
Sample 1
FPKM: 29.1
Cell types%
Keratinocytes: 60
Other cell types: 40
overview Female, age 30
Sample 2
FPKM: 27.1
Cell types%
Keratinocytes: 55
Other cell types: 45
N/A Male, age 57
Sample 3
FPKM: 22.0

SKIN - GTEx RNA-seq

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Average RPKM

8.6

GTEx sample id

RPKM

 

Skin - Not Sun Exposed (Suprapubic)

Skin - Not Sun Exposed (Suprapubic)
RPKM: 8.7
Samples: 250

Max RPKM: 16.2
Min RPKM: 3.1
Std RPKM: 2.3
Median RPKM: 8.6
GTEX-13NYC-0126-SM-5L3F4 16.2
GTEX-11WQK-1026-SM-5EQLX 15.6
GTEX-14A5H-0826-SM-5QGPJ 14.8
GTEX-U8XE-0226-SM-4E3J3 14.6
GTEX-ZVTK-0226-SM-51MRG 14.4
GTEX-WYJK-0526-SM-3NM8Z 13.8
GTEX-131XE-1626-SM-5K7VO 13.6
GTEX-144GL-0626-SM-5LU4D 13.4
Show all
 

Skin - Sun Exposed (Lower leg)

Skin - Sun Exposed (Lower leg)
RPKM: 8.4
Samples: 357

Max RPKM: 16.5
Min RPKM: 3.4
Std RPKM: 2.2
Median RPKM: 8.3
GTEX-13NYC-0326-SM-5K7WP 16.5
GTEX-X4XY-0226-SM-4E3IZ 16.4
GTEX-14BIL-0126-SM-5SI92 16.1
GTEX-11O72-0126-SM-59887 15.6
GTEX-ZUA1-0126-SM-5GU76 14.8
GTEX-146FH-0126-SM-5QGPP 13.9
GTEX-11WQK-0526-SM-5EQLD 13.5
GTEX-13N2G-2626-SM-5J1OT 13.3
Show all