CMTR1

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:10.3 FPKM
GTEx:15.4 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Low
Glandular cells:Low
Peripheral nerve/ganglion:Low

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA029954

 

Antibody HPA029979

 

Antibody HPA029980

 

Endothelial cells

Low   Low   Low  

Glandular cells

Low   Medium   Not detected  

Peripheral nerve/ganglion

Medium   Not detected   Not available  
     
     
     

COLON - HPA RNA-seq

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Average FPKM

10.3

overview Male, age 54
Sample 1
FPKM: 9.3
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 11.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 8.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 7.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 10.9
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 11.8
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 13.3
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

15.4

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 17.4
Samples: 149

Max RPKM: 28.2
Min RPKM: 10.2
Std RPKM: 2.9
Median RPKM: 17.4
GTEX-12WSL-1826-SM-5LZW9 28.2
GTEX-131XG-1526-SM-5GCNQ 25.4
GTEX-13PVQ-2726-SM-5L3H7 24.9
GTEX-ZY6K-1326-SM-5GZWP 23.9
GTEX-X15G-1526-SM-4PQZM 23.6
GTEX-13OW6-2226-SM-5N9FL 22.7
GTEX-XUW1-1826-SM-4BOQD 22.6
GTEX-1122O-1426-SM-5H11R 22.5
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 13.3
Samples: 196

Max RPKM: 24.8
Min RPKM: 5.1
Std RPKM: 3.9
Median RPKM: 12.6
GTEX-11P81-1126-SM-5GU5G 24.8
GTEX-11TUW-2026-SM-5EQL8 24.8
GTEX-QLQ7-1126-SM-4R1KN 24.3
GTEX-XXEK-1926-SM-4BRVD 23.8
GTEX-1339X-1626-SM-5IJDN 23.5
GTEX-111YS-1626-SM-5GZZ9 21.9
GTEX-ZYFC-2626-SM-5NQ6S 21.7
GTEX-13U4I-2426-SM-5LU34 21.4
Show all