BIN1

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:16.2 FPKM
GTEx:20.8 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Low

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA003894

 

Antibody HPA005437

 

Antibody CAB001945

 

Endothelial cells

Not detected   Medium   Not detected  

Glandular cells

Medium   High   Medium  

Peripheral nerve/ganglion

Not detected   Low   Medium  
     
     
     

COLON - HPA RNA-seq

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Average FPKM

16.2

overview Male, age 54
Sample 1
FPKM: 16.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 18.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 12.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 16.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 22.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 16.0
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 10.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

20.8

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 23.4
Samples: 149

Max RPKM: 68.8
Min RPKM: 7.2
Std RPKM: 9.3
Median RPKM: 22.3
GTEX-13O1R-2426-SM-5KLZZ 68.8
GTEX-WI4N-2226-SM-4OOS9 58.6
GTEX-12WSJ-1426-SM-5GCON 45.2
GTEX-11WQK-2526-SM-5CVL8 45.0
GTEX-YJ8O-1426-SM-5PNV9 42.9
GTEX-ZAJG-2626-SM-5S2NU 41.3
GTEX-ZLV1-1326-SM-4WWER 41.1
GTEX-146FH-2426-SM-5Q5EW 39.8
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 18.2
Samples: 196

Max RPKM: 54.5
Min RPKM: 8.4
Std RPKM: 6.5
Median RPKM: 16.5
GTEX-11WQK-2126-SM-5EQME 54.5
GTEX-ZYVF-2826-SM-5GIDK 45.6
GTEX-1339X-1626-SM-5IJDN 41.6
GTEX-12WSJ-1526-SM-5GCNI 41.5
GTEX-14BMV-2426-SM-5S2PP 36.2
GTEX-147JS-2526-SM-5S2Q8 36.0
GTEX-13W3W-2126-SM-5K7UX 34.8
GTEX-WQUQ-2526-SM-4MVNO 33.8
Show all