CALCOCO2

SKIN - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:42.0 FPKM
GTEx:23.5 RPKM

SKIN 1 - Immunohistochemistry

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Annotated protein
expression

Fibroblasts:Low
Keratinocytes:Low
Langerhans:Not detected
Melanocytes:Low

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA022989

 

Antibody HPA023019

 

Antibody HPA023195

 

Fibroblasts

Low   Low   Not detected  

Keratinocytes

Low   Not detected   Low  

Langerhans

Low   Not detected   Not detected  

Melanocytes

Low   Low   Low  
     

SKIN 2 - Immunohistochemistry

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Annotated protein
expression

Epidermal cells:Medium
 
 
 
 

Antibody staining

Antibody HPA022989

 

Antibody HPA023019

 

Antibody HPA023195

 

Epidermal cells

Medium   Low   Medium  
        
        
        
     

SKIN - HPA RNA-seq

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Average FPKM

42.0

overview Female, age 34
Sample 1
FPKM: 45.1
Cell types%
Keratinocytes: 60
Other cell types: 40
overview Female, age 30
Sample 2
FPKM: 54.9
Cell types%
Keratinocytes: 55
Other cell types: 45
N/A Male, age 57
Sample 3
FPKM: 26.1

SKIN - GTEx RNA-seq

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Average RPKM

23.5

GTEx sample id

RPKM

 

Skin - Not Sun Exposed (Suprapubic)

Skin - Not Sun Exposed (Suprapubic)
RPKM: 22.7
Samples: 250

Max RPKM: 42.3
Min RPKM: 14.7
Std RPKM: 4.1
Median RPKM: 21.9
GTEX-YB5K-2026-SM-4VDT3 42.3
GTEX-12WSL-2026-SM-5GCML 38.6
GTEX-ZLFU-1826-SM-4WWBV 37.1
GTEX-X3Y1-2026-SM-3P5YM 34.7
GTEX-ZYFG-1526-SM-5GZYM 33.2
GTEX-14BMU-1226-SM-5S2OR 32.8
GTEX-Y8LW-1526-SM-5IFHL 32.2
GTEX-13FH7-1126-SM-5K7UG 32.1
Show all
 

Skin - Sun Exposed (Lower leg)

Skin - Sun Exposed (Lower leg)
RPKM: 24.3
Samples: 357

Max RPKM: 40.3
Min RPKM: 14.2
Std RPKM: 4.6
Median RPKM: 23.7
GTEX-Y8LW-1826-SM-5S2MV 40.3
GTEX-RWS6-2026-SM-2XCB5 40.1
GTEX-TMMY-0226-SM-33HBA 39.7
GTEX-13OVI-1426-SM-5L3EY 39.3
GTEX-13OVG-1926-SM-5L3DK 38.3
GTEX-QDVN-2026-SM-3GAEP 37.6
GTEX-PLZ5-2026-SM-2S1O4 36.6
GTEX-WFG8-2226-SM-3GIL9 35.6
Show all