CCM2

COLON - Expression summary

? »

Protein expression

h
m
l
n

RNA expression

HPA:12.0 FPKM
GTEx:10.4 RPKM

COLON - Immunohistochemistry

? »

Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Medium

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA020273

 

Antibody HPA021669

 

Endothelial cells

Low   Low  

Glandular cells

High   Medium  

Peripheral nerve/ganglion

Medium   Medium  
   
   
   

COLON - HPA RNA-seq

? »

Average FPKM

12.0

overview Male, age 54
Sample 1
FPKM: 12.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 11.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 12.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 9.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 16.7
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 12.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 7.7
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

? »

Average RPKM

10.4

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 11.1
Samples: 149

Max RPKM: 23.3
Min RPKM: 5.8
Std RPKM: 2.6
Median RPKM: 10.8
GTEX-ZF28-2526-SM-57WFH 23.3
GTEX-139D8-2926-SM-5IJBM 18.5
GTEX-ZTTD-2626-SM-57WEX 16.8
GTEX-ZAJG-2626-SM-5S2NU 16.5
GTEX-Z93S-2626-SM-57WBX 16.2
GTEX-11EI6-2626-SM-5PNVT 15.8
GTEX-1339X-1726-SM-5P9J9 15.6
GTEX-1477Z-2126-SM-5Q5CM 15.6
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 9.7
Samples: 196

Max RPKM: 17.5
Min RPKM: 3.9
Std RPKM: 1.8
Median RPKM: 9.5
GTEX-147JS-2526-SM-5S2Q8 17.5
GTEX-XAJ8-0426-SM-47JYJ 15.6
GTEX-1399R-2226-SM-5P9JB 14.4
GTEX-ZAB4-2226-SM-5HL97 14.4
GTEX-13S86-1626-SM-5Q5C5 14.0
GTEX-13OW5-2626-SM-5MR3M 13.8
GTEX-ZYVF-2826-SM-5GIDK 13.8
GTEX-SNOS-1226-SM-4DM5H 13.7
Show all