AOAH

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:7.9 FPKM
GTEx:1.9 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:High
Peripheral nerve/ganglion:Low

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA021666

 

Antibody HPA026714

 

Antibody HPA026716

 

Endothelial cells

Not detected   Not detected   Low  

Glandular cells

High   Low   Medium  

Peripheral nerve/ganglion

Low   Not detected   Not detected  
     
     
     

COLON - HPA RNA-seq

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Average FPKM

7.9

overview Male, age 54
Sample 1
FPKM: 4.3
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 8.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 7.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 3.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 12.9
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 7.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 10.9
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

1.9

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 0.7
Samples: 149

Max RPKM: 3.9
Min RPKM: 0.1
Std RPKM: 0.5
Median RPKM: 0.6
GTEX-13X6I-2726-SM-5Q5ET 3.9
GTEX-ZAB4-2426-SM-5HL8A 3.4
GTEX-11ONC-1926-SM-5GU75 2.7
GTEX-WHPG-1626-SM-4M1ZL 1.9
GTEX-11TT1-0926-SM-5GU5M 1.7
GTEX-ZQG8-2426-SM-57WEE 1.6
GTEX-147GR-2826-SM-5RQK8 1.5
GTEX-WYVS-1126-SM-4SOJX 1.5
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 3.0
Samples: 196

Max RPKM: 8.4
Min RPKM: 0.1
Std RPKM: 2
Median RPKM: 2.5
GTEX-XBED-1526-SM-4AT5W 8.4
GTEX-Q2AH-1226-SM-48TZL 8.3
GTEX-13OVJ-1726-SM-5IJDZ 8.1
GTEX-ZV7C-1526-SM-5NQ72 7.6
GTEX-1122O-1526-SM-5N9CL 7.5
GTEX-11EM3-1526-SM-5A5KN 7.5
GTEX-14E6E-1526-SM-5RQIG 7.5
GTEX-131XG-1826-SM-5LZV4 6.9
Show all