VILL

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:31.1 FPKM
GTEx:15.1 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:High
Peripheral nerve/ganglion:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA035675

 

Antibody HPA035676

 

Endothelial cells

Not detected   Medium  

Glandular cells

High   Not detected  

Peripheral nerve/ganglion

Not detected   Not detected  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

31.1

overview Male, age 54
Sample 1
FPKM: 37.3
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 40.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 40.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 33.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 26.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 18.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 22.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

15.1

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 3.5
Samples: 149

Max RPKM: 13.6
Min RPKM: 0.8
Std RPKM: 1.7
Median RPKM: 3.1
GTEX-Y5LM-1426-SM-5RQJL 13.6
GTEX-V955-1726-SM-4JBHF 12.5
GTEX-XBED-1726-SM-47JYO 9.5
GTEX-11ONC-1926-SM-5GU75 8.8
GTEX-YEC3-2026-SM-4WWFL 7.4
GTEX-146FH-2426-SM-5Q5EW 6.9
GTEX-13X6K-2726-SM-5O9DG 6.6
GTEX-147GR-2826-SM-5RQK8 5.8
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 26.8
Samples: 196

Max RPKM: 89.9
Min RPKM: 0.8
Std RPKM: 19.2
Median RPKM: 29.8
GTEX-14E6E-1526-SM-5RQIG 89.9
GTEX-Y5LM-1526-SM-4VDTA 75.0
GTEX-R55G-1226-SM-48FDC 73.4
GTEX-131XG-1826-SM-5LZV4 67.2
GTEX-1399S-1926-SM-5J2M5 62.0
GTEX-1122O-1526-SM-5N9CL 61.3
GTEX-1399R-2226-SM-5P9JB 58.9
GTEX-Q2AI-0926-SM-48U1F 56.9
Show all