PIGC

COLON - Expression summary

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RNA expression

HPA:15.2 FPKM
GTEx:4.6 RPKM

COLON - Immunohistochemistry

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Antibody staining

Antibody HPA036663

 

Endothelial cells

Medium  

Glandular cells

Medium  

Peripheral nerve/ganglion

Low  
 
 
 

COLON - HPA RNA-seq

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Average FPKM

15.2

overview Male, age 54
Sample 1
FPKM: 11.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 17.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 12.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 12.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 14.8
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 18.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 19.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

4.6

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 4.8
Samples: 149

Max RPKM: 7.3
Min RPKM: 2.6
Std RPKM: 0.8
Median RPKM: 4.8
GTEX-132AR-2826-SM-5IJFV 7.3
GTEX-1399U-2226-SM-5KLZI 7.0
GTEX-11P81-1426-SM-5P9JN 6.5
GTEX-XV7Q-2226-SM-4BRVY 6.5
GTEX-WHPG-1626-SM-4M1ZL 6.4
GTEX-ZP4G-1526-SM-57WE5 6.3
GTEX-13SLW-2826-SM-5Q5ES 6.2
GTEX-146FH-2426-SM-5Q5EW 6.2
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 4.4
Samples: 196

Max RPKM: 6.5
Min RPKM: 0.6
Std RPKM: 0.7
Median RPKM: 4.4
GTEX-ZXES-1626-SM-5NQ7L 6.5
GTEX-145LS-2726-SM-5Q5D8 6.1
GTEX-12ZZZ-2426-SM-5GCNN 6.0
GTEX-11TTK-2426-SM-5PNYO 5.9
GTEX-14AS3-1126-SM-5Q5CR 5.8
GTEX-V955-1626-SM-4JBHJ 5.8
GTEX-OXRL-1426-SM-3NM9E 5.7
GTEX-Z93S-2426-SM-5HL8N 5.7
Show all