CCDC146

COLON - Expression summary

? »

Protein expression

h
m
l
n

RNA expression

HPA:1.4 FPKM
GTEx:5.8 RPKM

COLON - Immunohistochemistry

? »

Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Medium

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA020082

 

Antibody HPA020105

 

Endothelial cells

Low   Low  

Glandular cells

Medium   Medium  

Peripheral nerve/ganglion

Low   High  
   
   
   

COLON - HPA RNA-seq

? »

Average FPKM

1.4

overview Male, age 54
Sample 1
FPKM: 1.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 1.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 1.9
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 0.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 0.9
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 1.6
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 1.7
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

? »

Average RPKM

5.8

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 6.6
Samples: 149

Max RPKM: 14.3
Min RPKM: 1.8
Std RPKM: 2.6
Median RPKM: 6.2
GTEX-ZVT3-2826-SM-5GU6A 14.3
GTEX-14E6C-2226-SM-5QGQG 14.1
GTEX-147JS-2626-SM-5S2UX 13.2
GTEX-11EMC-1426-SM-5N9E4 12.8
GTEX-13CF2-1826-SM-5N9GK 12.6
GTEX-139D8-2926-SM-5IJBM 12.3
GTEX-139TS-2226-SM-5J2N1 11.8
GTEX-13FTW-2126-SM-5K7YG 11.7
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 4.9
Samples: 196

Max RPKM: 14.2
Min RPKM: 1.6
Std RPKM: 1.8
Median RPKM: 4.7
GTEX-13U4I-2426-SM-5LU34 14.2
GTEX-13O3P-2326-SM-5KM55 11.0
GTEX-147JS-2526-SM-5S2Q8 10.2
GTEX-ZYFC-2626-SM-5NQ6S 10.2
GTEX-14AS3-1126-SM-5Q5CR 9.1
GTEX-133LE-1526-SM-5IFEN 8.7
GTEX-13OW5-2626-SM-5MR3M 8.7
GTEX-XPVG-1826-SM-4B64X 8.1
Show all