DSC2

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:43.7 FPKM
GTEx:9.4 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Medium
Peripheral nerve/ganglion:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA011911

 

Antibody HPA012615

 

Endothelial cells

Low   Not detected  

Glandular cells

Medium   Medium  

Peripheral nerve/ganglion

Not detected   Not detected  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

43.7

overview Male, age 54
Sample 1
FPKM: 30.0
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 49.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 57.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 68.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 36.9
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 23.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 40.7
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

9.4

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 0.7
Samples: 149

Max RPKM: 5.1
Min RPKM: 0.1
Std RPKM: 0.6
Median RPKM: 0.4
GTEX-XBED-1726-SM-47JYO 5.1
GTEX-YEC3-2026-SM-4WWFL 3.4
GTEX-YJ8A-1726-SM-5P9IQ 3.3
GTEX-Y5LM-1426-SM-5RQJL 2.7
GTEX-ZPCL-1626-SM-57WGC 2.6
GTEX-146FH-2426-SM-5Q5EW 2.5
GTEX-11ONC-1926-SM-5GU75 2.4
GTEX-V955-1726-SM-4JBHF 2.2
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 18.1
Samples: 196

Max RPKM: 64.9
Min RPKM: 0.1
Std RPKM: 15.4
Median RPKM: 18.7
GTEX-111CU-1426-SM-5GZYP 64.9
GTEX-ZYWO-1626-SM-5E44H 64.7
GTEX-14E6E-1526-SM-5RQIG 59.1
GTEX-11P82-1026-SM-5BC5J 55.9
GTEX-131XG-1826-SM-5LZV4 54.3
GTEX-144GM-1226-SM-5LU52 49.9
GTEX-ZF2S-1926-SM-4WWAN 45.9
GTEX-ZV7C-1526-SM-5NQ72 45.6
Show all