NARS

SKIN - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:31.9 FPKM
GTEx:34.5 RPKM

SKIN 1 - Immunohistochemistry

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Annotated protein
expression

Fibroblasts:Low
Keratinocytes:Medium
Langerhans:Low
Melanocytes:Medium

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA040017

 

Antibody CAB034257

 

Fibroblasts

Low   Medium  

Keratinocytes

Medium   Medium  

Langerhans

Low   Medium  

Melanocytes

Medium   High  
   
   

SKIN 2 - Immunohistochemistry

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Annotated protein
expression

Epidermal cells:Medium
 
 
 
 

Antibody staining

Antibody HPA040017

 

Antibody CAB034257

 

Epidermal cells

Medium   Medium  
      
      
      
   
   

SKIN - HPA RNA-seq

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Average FPKM

31.9

overview Female, age 34
Sample 1
FPKM: 37.5
Cell types%
Keratinocytes: 60
Other cell types: 40
overview Female, age 30
Sample 2
FPKM: 32.5
Cell types%
Keratinocytes: 55
Other cell types: 45
N/A Male, age 57
Sample 3
FPKM: 25.8

SKIN - GTEx RNA-seq

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Average RPKM

34.5

GTEx sample id

RPKM

 

Skin - Not Sun Exposed (Suprapubic)

Skin - Not Sun Exposed (Suprapubic)
RPKM: 33.9
Samples: 250

Max RPKM: 51
Min RPKM: 21.3
Std RPKM: 5.1
Median RPKM: 33.8
GTEX-U8XE-0226-SM-4E3J3 51.0
GTEX-11WQK-1026-SM-5EQLX 49.1
GTEX-WEY5-2326-SM-3GIKK 47.9
GTEX-144GL-0626-SM-5LU4D 46.7
GTEX-XYKS-1426-SM-4BRUO 44.7
GTEX-11P82-1426-SM-5BC5L 44.6
GTEX-13X6K-0626-SM-5LU5D 44.4
GTEX-ZYWO-2226-SM-5GZXR 44.4
Show all
 

Skin - Sun Exposed (Lower leg)

Skin - Sun Exposed (Lower leg)
RPKM: 35.0
Samples: 357

Max RPKM: 55.2
Min RPKM: 19.2
Std RPKM: 5.5
Median RPKM: 34.5
GTEX-PVOW-0126-SM-2XCFA 55.2
GTEX-P44H-0226-SM-2XCEU 54.3
GTEX-11WQK-0526-SM-5EQLD 52.6
GTEX-X4XY-0226-SM-4E3IZ 52.4
GTEX-OOBK-0126-SM-2YUND 51.9
GTEX-11WQC-2526-SM-5CVLE 51.3
GTEX-VJWN-0126-SM-3GIK7 50.6
GTEX-XYKS-2126-SM-4E3IB 49.9
Show all