NARS

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:72.3 FPKM
GTEx:41.5 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody HPA040017

 

Antibody CAB034257

 

Endothelial cells

Low   Medium  

Glandular cells

High   Medium  

Peripheral nerve/ganglion

Not detected   Not available  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

72.3

overview Male, age 54
Sample 1
FPKM: 59.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 78.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 75.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 83.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 70.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 57.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 81.7
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

41.5

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 33.5
Samples: 149

Max RPKM: 62.9
Min RPKM: 16.4
Std RPKM: 8.5
Median RPKM: 33.2
GTEX-11WQK-2526-SM-5CVL8 62.9
GTEX-131XG-1526-SM-5GCNQ 58.2
GTEX-XAJ8-0726-SM-47JY5 56.6
GTEX-11TT1-0926-SM-5GU5M 50.1
GTEX-13O1R-2426-SM-5KLZZ 50.1
GTEX-14E6E-1726-SM-5S2R6 48.9
GTEX-11I78-1326-SM-5PNY9 46.8
GTEX-ZPIC-2626-SM-57WE2 46.6
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 49.5
Samples: 196

Max RPKM: 87.4
Min RPKM: 21.1
Std RPKM: 13.4
Median RPKM: 49.5
GTEX-11TT1-1026-SM-5PNW7 87.4
GTEX-131XG-1826-SM-5LZV4 82.6
GTEX-PWOO-1326-SM-48TCJ 80.6
GTEX-Q2AI-0926-SM-48U1F 76.2
GTEX-U4B1-1126-SM-4DXV3 76.1
GTEX-11P82-1026-SM-5BC5J 75.0
GTEX-145MN-1726-SM-5SIA6 72.6
GTEX-PWN1-1426-SM-48TDF 72.3
Show all