SORT1

SKIN - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:10.0 FPKM
GTEx:11.9 RPKM

SKIN 1 - Immunohistochemistry

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Annotated protein
expression

Fibroblasts:Not detected
Keratinocytes:Not detected
Langerhans:Not detected
Melanocytes:Low

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA006889

 

Antibody CAB011498

 

Fibroblasts

Not detected   Low  

Keratinocytes

Not detected   Low  

Langerhans

Not detected   Not detected  

Melanocytes

Low   Low  
   
   

SKIN 2 - Immunohistochemistry

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Annotated protein
expression

Epidermal cells:Not detected
 
 
 

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA006889

 

Antibody CAB011498

 

Epidermal cells

Not detected   Low  
      
      
      
   
   

SKIN - HPA RNA-seq

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Average FPKM

10.0

overview Female, age 34
Sample 1
FPKM: 12.5
Cell types%
Keratinocytes: 60
Other cell types: 40
overview Female, age 30
Sample 2
FPKM: 9.8
Cell types%
Keratinocytes: 55
Other cell types: 45
N/A Male, age 57
Sample 3
FPKM: 7.8

SKIN - GTEx RNA-seq

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Average RPKM

11.9

GTEx sample id

RPKM

 

Skin - Not Sun Exposed (Suprapubic)

Skin - Not Sun Exposed (Suprapubic)
RPKM: 10.6
Samples: 250

Max RPKM: 25.9
Min RPKM: 3.7
Std RPKM: 3
Median RPKM: 10.2
GTEX-YB5K-2026-SM-4VDT3 25.9
GTEX-11P7K-1126-SM-5HL4L 20.1
GTEX-ZT9W-1126-SM-57WDR 20.0
GTEX-12C56-1526-SM-5FQUQ 19.7
GTEX-12WSL-2026-SM-5GCML 19.4
GTEX-14E6C-2426-SM-5S2NF 18.0
GTEX-YEC4-1826-SM-4W1YP 17.8
GTEX-WFON-1926-SM-3LK7L 17.3
Show all
 

Skin - Sun Exposed (Lower leg)

Skin - Sun Exposed (Lower leg)
RPKM: 13.2
Samples: 357

Max RPKM: 29.2
Min RPKM: 5.6
Std RPKM: 3
Median RPKM: 12.8
GTEX-ZZPT-0226-SM-5E43X 29.2
GTEX-Y3I4-2126-SM-4TT7C 23.5
GTEX-XAJ8-0826-SM-47JY6 22.7
GTEX-ZXES-1826-SM-5E43S 22.7
GTEX-QCQG-1726-SM-3GIJ9 21.4
GTEX-ZVT2-2526-SM-51MT1 20.8
GTEX-131XG-2626-SM-5KM17 20.6
GTEX-NFK9-0226-SM-2HMKQ 20.6
Show all