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COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:23.6 FPKM
GTEx:15.6 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Low
Peripheral nerve/ganglion:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA006889

 

Antibody CAB011498

 

Endothelial cells

Medium   Medium  

Glandular cells

Medium   Low  

Peripheral nerve/ganglion

Not available   Not detected  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

23.6

overview Male, age 54
Sample 1
FPKM: 26.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 24.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 27.0
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 20.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 17.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 21.2
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 27.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

15.6

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 14.5
Samples: 149

Max RPKM: 37.6
Min RPKM: 5.8
Std RPKM: 4.6
Median RPKM: 13.8
GTEX-ZQG8-2426-SM-57WEE 37.6
GTEX-14C5O-2626-SM-5RQI5 30.5
GTEX-11ZU8-1126-SM-5EQ5K 28.9
GTEX-WFON-1326-SM-4LVMN 27.9
GTEX-YEC3-2026-SM-4WWFL 26.5
GTEX-XAJ8-0726-SM-47JY5 23.4
GTEX-12WSL-1826-SM-5LZW9 22.8
GTEX-11DXX-1926-SM-5EGJK 22.7
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 16.6
Samples: 196

Max RPKM: 50.6
Min RPKM: 7
Std RPKM: 5
Median RPKM: 15.9
GTEX-13OVG-1426-SM-5K7VP 50.6
GTEX-XAJ8-0426-SM-47JYJ 44.6
GTEX-13W3W-2126-SM-5K7UX 38.0
GTEX-13CF3-1426-SM-5K7YY 26.8
GTEX-145ME-0826-SM-5O9AF 26.2
GTEX-13OVI-2026-SM-5J1MU 26.1
GTEX-QLQ7-1126-SM-4R1KN 25.6
GTEX-Y5LM-1526-SM-4VDTA 25.3
Show all