SORT1

SOFT TISSUE - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:33.5 FPKM
GTEx:22.5 RPKM

SOFT TISSUE 1 - Immunohistochemistry

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Annotated protein
expression

Adipocytes:Not detected
Chondrocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA006889

 

Antibody CAB011498

 

Adipocytes

Not detected   Low  

Chondrocytes

Not available   Low  

Fibroblasts

Low   Not detected  

Peripheral nerve

Not detected   Not detected  
   
   
   

SOFT TISSUE 2 - Immunohistochemistry

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Annotated protein
expression

Adipocytes:Not detected
Chondrocytes:Not available
Fibroblasts:Not detected
Peripheral nerve:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA006889

 

Antibody CAB011498

 

Adipocytes

Not detected   Medium  

Chondrocytes

Not available   Not available  

Fibroblasts

Not detected   Not detected  

Peripheral nerve

Not detected   Not detected  
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

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Average FPKM

33.5

N/A Female, age 80
Sample 1
FPKM: 28.1
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
FPKM: 45.3
N/A Female, age 57
Sample 3
FPKM: 42.7
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
FPKM: 24.2
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
FPKM: 27.4
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

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Average RPKM

22.5

GTEx sample id

RPKM

 

Adipose - Subcutaneous

Adipose - Subcutaneous
RPKM: 26.2
Samples: 350

Max RPKM: 56.8
Min RPKM: 7.4
Std RPKM: 9.1
Median RPKM: 25.8
GTEX-O5YT-0226-SM-32PK5 56.8
GTEX-WEY5-1926-SM-3GIL8 55.8
GTEX-ZDTT-2626-SM-5S2OP 48.6
GTEX-PWN1-0226-SM-5SI7O 47.4
GTEX-S3XE-1626-SM-3K2AJ 44.6
GTEX-NFK9-0326-SM-3MJGV 43.8
GTEX-QLQW-1226-SM-2S1Q9 43.8
GTEX-12696-2526-SM-5EQLN 43.5
Show all
 

Adipose - Visceral (Omentum)

Adipose - Visceral (Omentum)
RPKM: 18.9
Samples: 227

Max RPKM: 60
Min RPKM: 3.4
Std RPKM: 9.6
Median RPKM: 17
GTEX-11DXX-2026-SM-5EGJL 60.0
GTEX-XAJ8-0226-SM-4GIB2 43.2
GTEX-131XG-0126-SM-5K7UJ 42.9
GTEX-ZT9W-1026-SM-57WG5 40.4
GTEX-12WSL-1126-SM-5CVNK 40.2
GTEX-Y8LW-0926-SM-4VBQ8 40.0
GTEX-ZP4G-1326-SM-5EGIW 39.5
GTEX-1211K-1226-SM-5EQ4N 39.1
Show all