HMGCS2

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:278.4 FPKM
GTEx:93.1 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:High
Peripheral nerve/ganglion:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA027423

 

Antibody HPA027442

 

Antibody CAB032906

 

Endothelial cells

Not detected   Not detected   Low  

Glandular cells

High   High   High  

Peripheral nerve/ganglion

Not available   Not detected   Not detected  
     
     
     

COLON - HPA RNA-seq

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Average FPKM

278.4

overview Male, age 54
Sample 1
FPKM: 44.5
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 193.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 343.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 448.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 80.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 386.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 452.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

93.1

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 1.6
Samples: 149

Max RPKM: 48.6
Min RPKM: 0
Std RPKM: 5.8
Median RPKM: 0.1
GTEX-Y5LM-1426-SM-5RQJL 48.6
GTEX-WQUQ-2626-SM-4MVNP 31.3
GTEX-XBED-1726-SM-47JYO 26.6
GTEX-YJ8A-1726-SM-5P9IQ 26.5
GTEX-V955-1726-SM-4JBHF 14.1
GTEX-146FH-2426-SM-5Q5EW 11.2
GTEX-11ONC-1926-SM-5GU75 11.0
GTEX-11EQ9-1526-SM-5PNY7 10.1
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 184.5
Samples: 196

Max RPKM: 609.9
Min RPKM: 0
Std RPKM: 162.3
Median RPKM: 180.1
GTEX-Y3IK-1826-SM-4WWDS 609.9
GTEX-ZT9W-1826-SM-51MQX 585.5
GTEX-ZYWO-1626-SM-5E44H 579.2
GTEX-11EM3-1526-SM-5A5KN 571.1
GTEX-ZF2S-1926-SM-4WWAN 540.8
GTEX-Y5LM-1526-SM-4VDTA 505.6
GTEX-P4QT-1426-SM-3NMCX 497.4
GTEX-XUJ4-2026-SM-4BOOW 490.3
Show all