HSD17B4

COLON - Expression summary

? »

Protein expression

h
m
l
n

RNA expression

HPA:53.5 FPKM
GTEx:27.7 RPKM

COLON - Immunohistochemistry

? »

Annotated protein
expression

Endothelial cells:Low
Glandular cells:High
Peripheral nerve/ganglion:Low

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA021302

 

Antibody HPA021311

 

Antibody HPA021479

 

Endothelial cells

Low   Low   Not detected  

Glandular cells

High   High   Medium  

Peripheral nerve/ganglion

Low   Not available   Medium  
     
     

COLON - HPA RNA-seq

? »

Average FPKM

53.5

overview Male, age 54
Sample 1
FPKM: 39.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 56.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 68.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 45.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 46.8
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 48.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 69.3
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

? »

Average RPKM

27.7

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 20.4
Samples: 149

Max RPKM: 33.1
Min RPKM: 10.9
Std RPKM: 3.8
Median RPKM: 20
GTEX-131XG-1526-SM-5GCNQ 33.1
GTEX-YEC3-2026-SM-4WWFL 32.0
GTEX-12WSJ-1426-SM-5GCON 29.8
GTEX-13CF3-1326-SM-5LZXZ 29.5
GTEX-11TT1-0926-SM-5GU5M 28.9
GTEX-12WSL-1826-SM-5LZW9 28.4
GTEX-146FH-2426-SM-5Q5EW 28.3
GTEX-13X6I-2726-SM-5Q5ET 28.1
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 35.0
Samples: 196

Max RPKM: 71.4
Min RPKM: 9
Std RPKM: 12.2
Median RPKM: 34.4
GTEX-XV7Q-2126-SM-4BRVX 71.4
GTEX-PWOO-1326-SM-48TCJ 65.3
GTEX-R53T-1326-SM-48FCQ 62.2
GTEX-145LT-0926-SM-5LU9C 59.9
GTEX-O5YT-1426-SM-3MJHC 59.8
GTEX-13W3W-2126-SM-5K7UX 59.0
GTEX-WFG7-1526-SM-4LVMG 57.8
GTEX-PLZ5-1126-SM-3P613 57.4
Show all