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COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:29.0 FPKM
GTEx:19.2 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Medium
Peripheral nerve/ganglion:Medium

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA036424

 

Antibody HPA040881

 

Endothelial cells

Low   Not detected  

Glandular cells

Medium   High  

Peripheral nerve/ganglion

Medium   High  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

29.0

overview Male, age 54
Sample 1
FPKM: 20.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 32.0
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 30.0
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 25.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 28.0
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 30.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 36.2
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

19.2

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 19.7
Samples: 149

Max RPKM: 36.8
Min RPKM: 13.2
Std RPKM: 3.4
Median RPKM: 19.3
GTEX-11TT1-0926-SM-5GU5M 36.8
GTEX-ZTTD-2626-SM-57WEX 30.2
GTEX-131XG-1526-SM-5GCNQ 29.3
GTEX-WI4N-2226-SM-4OOS9 27.7
GTEX-13U4I-2626-SM-5SI9C 27.6
GTEX-13O1R-2426-SM-5KLZZ 27.4
GTEX-12WSL-1826-SM-5LZW9 26.8
GTEX-XAJ8-0726-SM-47JY5 26.6
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 18.7
Samples: 196

Max RPKM: 30.3
Min RPKM: 6.2
Std RPKM: 3.1
Median RPKM: 18.3
GTEX-ZYVF-2826-SM-5GIDK 30.3
GTEX-11TT1-1026-SM-5PNW7 29.5
GTEX-1339X-1626-SM-5IJDN 29.0
GTEX-13U4I-2426-SM-5LU34 28.0
GTEX-XYKS-2226-SM-4E3IU 26.7
GTEX-13W3W-2126-SM-5K7UX 26.4
GTEX-O5YT-1426-SM-3MJHC 26.4
GTEX-147F3-1926-SM-5SIB9 25.0
Show all