PTPRA

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:30.6 FPKM
GTEx:20.1 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:Low

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA029412

 

Antibody CAB034366

 

Endothelial cells

High   Low  

Glandular cells

Medium   Medium  

Peripheral nerve/ganglion

Medium   Not detected  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

30.6

overview Male, age 54
Sample 1
FPKM: 19.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 31.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 30.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 23.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 27.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 34.0
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 48.2
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

20.1

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 20.3
Samples: 149

Max RPKM: 30.9
Min RPKM: 14.2
Std RPKM: 3.2
Median RPKM: 20
GTEX-145LS-2926-SM-5O99G 30.9
GTEX-147GR-2826-SM-5RQK8 30.1
GTEX-13SLW-2826-SM-5Q5ES 29.5
GTEX-12ZZY-2726-SM-5EQ45 28.8
GTEX-132NY-2726-SM-5PNY2 27.1
GTEX-WFON-1326-SM-4LVMN 26.8
GTEX-YECK-2826-SM-5IFHF 26.7
GTEX-11P81-1426-SM-5P9JN 26.6
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 19.8
Samples: 196

Max RPKM: 33.9
Min RPKM: 11.5
Std RPKM: 3.5
Median RPKM: 19.4
GTEX-13O3O-2526-SM-5L3DR 33.9
GTEX-12ZZZ-2426-SM-5GCNN 32.9
GTEX-ZXES-1626-SM-5NQ7L 31.5
GTEX-ZYVF-2826-SM-5GIDK 30.4
GTEX-13FHP-2426-SM-5KLZ5 29.7
GTEX-11TTK-2426-SM-5PNYO 29.1
GTEX-145LS-2726-SM-5Q5D8 29.1
GTEX-11O72-2226-SM-5PNW2 28.4
Show all