IQCA1

COLON - Expression summary

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RNA expression

HPA:0.2 FPKM
GTEx:0.1 RPKM

COLON - Immunohistochemistry

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Antibody staining

Antibody HPA031548

 

Endothelial cells

Low  

Glandular cells

High  

Peripheral nerve/ganglion

Medium  
 
 

COLON - HPA RNA-seq

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Average FPKM

0.2

overview Male, age 54
Sample 1
FPKM: 0.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 0.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 0.0
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 0.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 0.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 0.2
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 0.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

0.1

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 0.1
Samples: 149

Max RPKM: 0.9
Min RPKM: 0
Std RPKM: 0.1
Median RPKM: 0.1
GTEX-11TT1-0926-SM-5GU5M 0.9
GTEX-13X6I-2726-SM-5Q5ET 0.9
GTEX-148VJ-2426-SM-5NQ9Y 0.5
GTEX-117XS-2226-SM-5GIE1 0.4
GTEX-ZAB4-2426-SM-5HL8A 0.4
GTEX-11DXY-2026-SM-5N9CZ 0.3
GTEX-11WQK-2526-SM-5CVL8 0.3
GTEX-1212Z-1826-SM-5FQSH 0.3
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 0.1
Samples: 196

Max RPKM: 0.7
Min RPKM: 0
Std RPKM: 0.1
Median RPKM: 0.1
GTEX-14BMV-2426-SM-5S2PP 0.7
GTEX-11WQK-2126-SM-5EQME 0.6
GTEX-13O3P-2326-SM-5KM55 0.6
GTEX-ZYVF-2826-SM-5GIDK 0.6
GTEX-11GSP-1626-SM-5986N 0.4
GTEX-11O72-2226-SM-5PNW2 0.4
GTEX-1339X-1626-SM-5IJDN 0.4
GTEX-145LS-2726-SM-5Q5D8 0.4
Show all