ARFIP2

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:21.4 FPKM
GTEx:16.7 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Low

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA038156

 

Antibody CAB032985

 

Endothelial cells

Not detected   Medium  

Glandular cells

Medium   Medium  

Peripheral nerve/ganglion

Medium   Low  
   
   

COLON - HPA RNA-seq

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Average FPKM

21.4

overview Male, age 54
Sample 1
FPKM: 20.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 20.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 23.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 14.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 14.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 23.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 32.0
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

16.7

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 13.2
Samples: 149

Max RPKM: 25.9
Min RPKM: 8.1
Std RPKM: 2.9
Median RPKM: 12.7
GTEX-14E6C-2226-SM-5QGQG 25.9
GTEX-13O1R-2426-SM-5KLZZ 24.0
GTEX-11WQK-2526-SM-5CVL8 23.6
GTEX-14A5H-1626-SM-5SIAN 21.7
GTEX-11TUW-2326-SM-5EQMO 21.6
GTEX-148VJ-2426-SM-5NQ9Y 21.6
GTEX-Y9LG-1326-SM-4VBQB 19.7
GTEX-139D8-2926-SM-5IJBM 19.3
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 20.2
Samples: 196

Max RPKM: 41.8
Min RPKM: 9
Std RPKM: 6.2
Median RPKM: 20.5
GTEX-PWOO-1326-SM-48TCJ 41.8
GTEX-T5JW-1126-SM-4DM5V 35.9
GTEX-S4Q7-0826-SM-4AD5E 35.6
GTEX-XUJ4-2026-SM-4BOOW 33.4
GTEX-146FQ-1926-SM-5NQBY 31.7
GTEX-13S86-1626-SM-5Q5C5 30.9
GTEX-111CU-1426-SM-5GZYP 30.8
GTEX-U4B1-1126-SM-4DXV3 30.2
Show all