SLC6A6

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:3.0 FPKM
GTEx:3.7 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Low

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA015028

 

Antibody HPA016488

 

Endothelial cells

Medium   Low  

Glandular cells

Medium   High  

Peripheral nerve/ganglion

Medium   Not detected  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

3.0

overview Male, age 54
Sample 1
FPKM: 3.0
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 3.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 2.9
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 0.0
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 4.8
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 3.0
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 3.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

3.7

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 3.2
Samples: 149

Max RPKM: 12.9
Min RPKM: 0.6
Std RPKM: 1.7
Median RPKM: 2.6
GTEX-11TUW-2326-SM-5EQMO 12.9
GTEX-11I78-1326-SM-5PNY9 7.6
GTEX-13111-1926-SM-5GCOL 7.6
GTEX-11WQK-2526-SM-5CVL8 7.5
GTEX-YEC3-2026-SM-4WWFL 7.2
GTEX-ZXES-1726-SM-5E43G 6.9
GTEX-WFON-1326-SM-4LVMN 6.6
GTEX-11PRG-2026-SM-5GU5F 6.1
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 4.2
Samples: 196

Max RPKM: 68.1
Min RPKM: 0.9
Std RPKM: 5.1
Median RPKM: 3.6
GTEX-14C38-2626-SM-5RQI4 68.1
GTEX-11TUW-2026-SM-5EQL8 28.5
GTEX-XAJ8-0426-SM-47JYJ 13.4
GTEX-ZAB4-2226-SM-5HL97 10.8
GTEX-13O3O-2526-SM-5L3DR 10.6
GTEX-147JS-2526-SM-5S2Q8 9.9
GTEX-13OVJ-1726-SM-5IJDZ 9.7
GTEX-TKQ1-0626-SM-4DXTS 7.6
Show all