COL5A1

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:18.6 FPKM
GTEx:31.4 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA030769

 

Endothelial cells

Low  

Glandular cells

Medium  

Peripheral nerve/ganglion

Not detected  
 
 
 

COLON - HPA RNA-seq

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Average FPKM

18.6

overview Male, age 54
Sample 1
FPKM: 29.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 12.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 13.9
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 14.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 27.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 22.6
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 9.0
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

31.4

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 42.0
Samples: 149

Max RPKM: 78.3
Min RPKM: 15.8
Std RPKM: 12.8
Median RPKM: 40.7
GTEX-ZVT3-2826-SM-5GU6A 78.3
GTEX-13OW8-2726-SM-5L3FZ 72.6
GTEX-X15G-1526-SM-4PQZM 70.0
GTEX-12WSD-2626-SM-5EGJE 66.8
GTEX-11DXY-2026-SM-5N9CZ 66.4
GTEX-YECK-2826-SM-5IFHF 66.1
GTEX-139D8-2926-SM-5IJBM 65.7
GTEX-13FTW-2126-SM-5K7YG 63.9
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 20.9
Samples: 196

Max RPKM: 80
Min RPKM: 2.7
Std RPKM: 15.5
Median RPKM: 16.4
GTEX-147JS-2526-SM-5S2Q8 80.0
GTEX-XAJ8-0426-SM-47JYJ 67.8
GTEX-13O3O-2526-SM-5L3DR 62.7
GTEX-Z93S-2426-SM-5HL8N 59.6
GTEX-11O72-2226-SM-5PNW2 57.9
GTEX-U3ZH-1326-SM-4DXSF 55.0
GTEX-11GSP-1626-SM-5986N 54.6
GTEX-11ZVC-2126-SM-5EGJ1 54.5
Show all