COPB1

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:49.9 FPKM
GTEx:20.7 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:Medium

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA043954

 

Antibody HPA064403

 

Antibody CAB012338

 

Endothelial cells

Medium   Medium   Low  

Glandular cells

High   Medium   Medium  

Peripheral nerve/ganglion

Medium   Not available   Low  
     
     
     

COLON - HPA RNA-seq

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Average FPKM

49.9

overview Male, age 54
Sample 1
FPKM: 57.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 55.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 54.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 35.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 47.8
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 47.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 51.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

20.7

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 18.4
Samples: 149

Max RPKM: 33.3
Min RPKM: 10.9
Std RPKM: 2.7
Median RPKM: 18.1
GTEX-11WQK-2526-SM-5CVL8 33.3
GTEX-YJ8A-1726-SM-5P9IQ 25.4
GTEX-11TT1-0926-SM-5GU5M 24.4
GTEX-XAJ8-0726-SM-47JY5 24.2
GTEX-ZTSS-1226-SM-51MSZ 24.0
GTEX-WFON-1326-SM-4LVMN 23.2
GTEX-139D8-2926-SM-5IJBM 23.1
GTEX-13VXT-2026-SM-5L3EW 23.0
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 23.1
Samples: 196

Max RPKM: 41.5
Min RPKM: 14.2
Std RPKM: 4.1
Median RPKM: 22.7
GTEX-11TT1-1026-SM-5PNW7 41.5
GTEX-O5YT-1426-SM-3MJHC 37.5
GTEX-PWOO-1326-SM-48TCJ 36.9
GTEX-OXRK-1726-SM-3NB16 33.7
GTEX-R53T-1326-SM-48FCQ 33.6
GTEX-QV31-0826-SM-4R1KR 32.1
GTEX-132AR-2726-SM-5PNVN 31.9
GTEX-U4B1-1126-SM-4DXV3 31.8
Show all